Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A507DVK5 | A0A507DXQ4 | A0A507DVK5 | A0A507DXQ4 | Brix domain-containing protein. | Protein MAK16; Belongs to the MAK16 family. | 0.995 |
A0A507DVK5 | A0A507E1L1 | A0A507DVK5 | A0A507E1L1 | Brix domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.977 |
A0A507DVK5 | A0A507E7L7 | A0A507DVK5 | A0A507E7L7 | Brix domain-containing protein. | RNA helicase. | 0.982 |
A0A507DVK5 | A0A507E7L9 | A0A507DVK5 | A0A507E7L9 | Brix domain-containing protein. | Uncharacterized protein. | 0.995 |
A0A507DVK5 | A0A507ECZ6 | A0A507DVK5 | A0A507ECZ6 | Brix domain-containing protein. | Uncharacterized protein. | 0.984 |
A0A507DVK5 | A0A507EDC1 | A0A507DVK5 | A0A507EDC1 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.973 |
A0A507DVK5 | ERB1 | A0A507DVK5 | A0A507EGT1 | Brix domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.968 |
A0A507DVK5 | NOP7 | A0A507DVK5 | A0A507DVT3 | Brix domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.979 |
A0A507DVK5 | SPB1 | A0A507DVK5 | A0A507EC11 | Brix domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.960 |
A0A507DVK5 | YTM1 | A0A507DVK5 | A0A507E1A6 | Brix domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.976 |
A0A507DXQ4 | A0A507DVK5 | A0A507DXQ4 | A0A507DVK5 | Protein MAK16; Belongs to the MAK16 family. | Brix domain-containing protein. | 0.995 |
A0A507DXQ4 | A0A507E1L1 | A0A507DXQ4 | A0A507E1L1 | Protein MAK16; Belongs to the MAK16 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.947 |
A0A507DXQ4 | A0A507E7L7 | A0A507DXQ4 | A0A507E7L7 | Protein MAK16; Belongs to the MAK16 family. | RNA helicase. | 0.978 |
A0A507DXQ4 | A0A507E7L9 | A0A507DXQ4 | A0A507E7L9 | Protein MAK16; Belongs to the MAK16 family. | Uncharacterized protein. | 0.983 |
A0A507DXQ4 | A0A507ECZ6 | A0A507DXQ4 | A0A507ECZ6 | Protein MAK16; Belongs to the MAK16 family. | Uncharacterized protein. | 0.990 |
A0A507DXQ4 | A0A507EDC1 | A0A507DXQ4 | A0A507EDC1 | Protein MAK16; Belongs to the MAK16 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.989 |
A0A507DXQ4 | ERB1 | A0A507DXQ4 | A0A507EGT1 | Protein MAK16; Belongs to the MAK16 family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.946 |
A0A507DXQ4 | NOP7 | A0A507DXQ4 | A0A507DVT3 | Protein MAK16; Belongs to the MAK16 family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.977 |
A0A507DXQ4 | SPB1 | A0A507DXQ4 | A0A507EC11 | Protein MAK16; Belongs to the MAK16 family. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.983 |
A0A507DXQ4 | YTM1 | A0A507DXQ4 | A0A507E1A6 | Protein MAK16; Belongs to the MAK16 family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.985 |
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