STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269405_00744Unannotated protein. (207 aa)    
Predicted Functional Partners:
GCA_001269405_03600
Unannotated protein.
 
  
 0.873
GCA_001269405_03873
Unannotated protein.
  
 
 0.864
GCA_001269405_03386
Unannotated protein.
    
 0.855
GCA_001269405_00742
Unannotated protein.
 
    0.798
GCA_001269405_00743
Unannotated protein.
       0.626
GCA_001269405_00017
Unannotated protein.
 
  
 0.624
GCA_001269405_00367
Unannotated protein.
    
 0.578
GCA_001269405_03844
Unannotated protein.
    
 0.478
GCA_001269405_03722
Unannotated protein.
   
   0.477
GCA_001269405_02167
Unannotated protein.
    
  0.420
Your Current Organism:
Limnohabitans sp. 2KL3
NCBI taxonomy Id: 1100700
Other names: L. sp. 2KL-3, Limnohabitans sp. 2KL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.