STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269405_01078Unannotated protein. (403 aa)    
Predicted Functional Partners:
GCA_001269405_01079
Unannotated protein.
 
 
 0.990
GCA_001269405_02832
Unannotated protein.
 
 
 0.957
GCA_001269405_04178
Unannotated protein.
 
 
 0.957
GCA_001269405_01074
Unannotated protein.
 
  
 0.903
GCA_001269405_04169
Unannotated protein.
 
  
 0.894
GCA_001269405_01081
Unannotated protein.
  
  
 0.850
GCA_001269405_02834
Unannotated protein.
 
  
 0.843
GCA_001269405_00905
Unannotated protein.
 
 
 
 0.807
GCA_001269405_01077
Unannotated protein.
       0.773
GCA_001269405_01073
Unannotated protein.
  
    0.758
Your Current Organism:
Limnohabitans sp. 2KL3
NCBI taxonomy Id: 1100700
Other names: L. sp. 2KL-3, Limnohabitans sp. 2KL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.