STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001269345_00955Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_001269345_01617
Unannotated protein.
 
 
 0.992
GCA_001269345_00956
Unannotated protein.
       0.689
GCA_001269345_00954
Unannotated protein.
     
 0.548
GCA_001269345_02590
Unannotated protein.
    
   0.480
GCA_001269345_01362
Unannotated protein.
    
  0.475
GCA_001269345_00259
Unannotated protein.
 
   
 0.473
GCA_001269345_01172
Unannotated protein.
 
   
 0.447
GCA_001269345_01327
Unannotated protein.
    
  0.438
GCA_001269345_02133
Unannotated protein.
     
 0.414
GCA_001269345_02637
Unannotated protein.
      
 0.412
Your Current Organism:
Limnohabitans sp. 2KL27
NCBI taxonomy Id: 1100705
Other names: L. sp. 2KL-27, Limnohabitans sp. 2KL-27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.