STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384475_00924Unannotated protein. (891 aa)    
Predicted Functional Partners:
GCA_000384475_00070
Unannotated protein.
    
 
 0.827
GCA_000384475_00002
Unannotated protein.
     
 0.611
GCA_000384475_01107
Unannotated protein.
 
  
  0.567
GCA_000384475_03786
Unannotated protein.
     
 0.551
GCA_000384475_00925
Unannotated protein.
       0.509
GCA_000384475_02998
Unannotated protein.
 
  
 0.495
GCA_000384475_02533
Unannotated protein.
    
  0.456
GCA_000384475_04152
Unannotated protein.
   
 
  0.454
GCA_000384475_02720
Unannotated protein.
 
     0.441
GCA_000384475_00926
Unannotated protein.
       0.434
Your Current Organism:
Methylopila sp. M107
NCBI taxonomy Id: 1101190
Other names: M. sp. M107
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.