Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0002Hypothetical protein. (393 aa)    
Predicted Functional Partners:
CF8_0003
ATPase.
 
  
 0.915
CF8_0001
Protease, transglutaminase-like protein.
 
    0.903
CF8_0708
Hypothetical protein.
 
    0.802
CF8_0704
Fibronectin-related protein.
 
     0.782
CF8_0702
Hypothetical protein.
 
     0.701
CF8_0649
Forkhead-associated protein.
 
     0.695
CF8_0706
ATPase.
 
  
 0.668
CF8_0006
Hypothetical protein.
  
    0.546
CF8_0004
LigA.
       0.544
CF8_0005
Hypothetical protein.
       0.544
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.