Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0042Glycosyl transferase. (270 aa)    
Predicted Functional Partners:
CF8_0040
Glycosyltransferase.
 
     0.910
CF8_0041
Carbohydrate translocase.
 
 
  0.875
CF8_0039
NAD-dependent epimerase/dehydratase family.
 
    0.870
CF8_3857
Glycosyl transferase family protein.
   
  0.619
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.549
CF8_2870
Glycosyl transferase family 2.
 
 
 0.517
CF8_3323
Sugar transferase.
 
  
 0.494
CF8_3177
Sugar transferase.
 
  
 0.490
CF8_3181
Glycosyl transferase family 2.
  
 
 0.480
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
    
   0.463
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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