STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0072Carbamoyl-phosphate synthase L chain. (644 aa)    
Predicted Functional Partners:
CF8_0165
Carboxyl transferase.
 0.996
CF8_3593
Carboxyl transferase.
 0.996
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
 
 0.995
CF8_0071
propionyl-CoA carboxylase.
 0.984
CF8_3009
Carboxyl transferase.
 
 0.961
CF8_1140
propionyl-CoA carboxylase.
 
 0.960
CF8_3637
propionyl-CoA carboxylase.
 
 0.954
CF8_3008
biotin--acetyl-CoA-carboxylase ligase.
 
  
 0.951
CF8_1615
Urea amidolyase related protein.
 
 
  0.932
CF8_1141
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.925
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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