Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0072Carbamoyl-phosphate synthase L chain. (644 aa)    
Predicted Functional Partners:
CF8_0165
Carboxyl transferase.
 0.994
CF8_3593
Carboxyl transferase.
 0.994
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
 
 0.986
CF8_1615
Urea amidolyase related protein.
 
  0.973
CF8_0071
propionyl-CoA carboxylase.
 0.972
CF8_3009
Carboxyl transferase.
 
 0.931
CF8_1140
propionyl-CoA carboxylase.
 
 0.929
CF8_3637
propionyl-CoA carboxylase.
  
 0.915
CF8_1141
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.899
CF8_0073
hydroxymethylglutaryl-CoA lyase.
 
 
 0.882
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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