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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
CF8_0080DNA-(apurinic or apyrimidinic site) lyase; Belongs to the FPG family. (384 aa)    
Predicted Functional Partners:
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
  
  
 
0.862
CF8_2455
formamidopyrimidine-DNA glycolase.
  
   
 0.826
CF8_1077
formamidopyrimidine-DNA glycolase; Belongs to the FPG family.
  
  
 
0.769
CF8_0081
Hypothetical protein.
       0.550
CF8_3205
ATP-dependent DNA ligase.
 
     0.547
CF8_2751
Hypothetical protein.
  
 
 0.522
CF8_3211
Hypothetical protein.
  
     0.507
CF8_2456
DEAD/DEAH box helicase domain-containing.
  
    0.482
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.468
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
  
 0.455
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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