STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0158Alcohol dehydrogenase. (327 aa)    
Predicted Functional Partners:
CF8_2801
PTS system, fructose subfamily, IIC subunit.
     
 0.808
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
    
 0.660
CF8_2797
Alcohol dehydrogenase.
  
 
 0.628
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
     
 0.619
CF8_1351
Aldehyde dehydrogenase.
  
 0.563
maiA
sp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
       0.561
CF8_0565
Short-chain dehydrogenase/reductase SDR.
     
 0.528
CF8_2315
3-hydroxyacyl-CoA dehydrogenase.
  
 0.522
CF8_3649
Short chain enoyl-CoA hydratase.
  
 0.522
CF8_0737
Citrate synthase; Belongs to the citrate synthase family.
    
  0.474
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.