STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maiAsp/Glu/hydantoin racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. (282 aa)    
Predicted Functional Partners:
CF8_3302
Aspartate racemase.
     
 0.761
CF8_3072
Succinate dehydrogenase flavoprotein subunit.
   
 
  0.612
CF8_3075
Succinate dehydrogenase flavoprotein subunit.
   
 
  0.612
CF8_0158
Alcohol dehydrogenase.
       0.561
CF8_2804
Isochorismatase hydrolase.
    
 0.467
CF8_3477
Hydrolase.
    
 0.467
CF8_3994
MmgE/PrpD family protein.
 
     0.461
CF8_0160
TRAP dicarboxylate transporter- DctP subunit.
       0.416
CF8_4014
3-hydroxyisobutyrate dehydrogenase.
  
     0.407
CF8_4019
MmgE/PrpD.
 
     0.407
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.