Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CF8_0173 | CF8_0174 | ATPase domain-containing protein. | Ig domain-containing protein. | 0.584 |
CF8_0173 | CF8_0175 | ATPase domain-containing protein. | acyl-CoA dehydrogenase domain-containing. | 0.433 |
CF8_0173 | CF8_0176 | ATPase domain-containing protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.433 |
CF8_0174 | CF8_0173 | Ig domain-containing protein. | ATPase domain-containing protein. | 0.584 |
CF8_0174 | CF8_0175 | Ig domain-containing protein. | acyl-CoA dehydrogenase domain-containing. | 0.559 |
CF8_0174 | CF8_0176 | Ig domain-containing protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.559 |
CF8_0174 | CF8_0177 | Ig domain-containing protein. | Hypothetical protein. | 0.449 |
CF8_0175 | CF8_0173 | acyl-CoA dehydrogenase domain-containing. | ATPase domain-containing protein. | 0.433 |
CF8_0175 | CF8_0174 | acyl-CoA dehydrogenase domain-containing. | Ig domain-containing protein. | 0.559 |
CF8_0175 | CF8_0176 | acyl-CoA dehydrogenase domain-containing. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.773 |
CF8_0175 | CF8_0177 | acyl-CoA dehydrogenase domain-containing. | Hypothetical protein. | 0.608 |
CF8_0176 | CF8_0173 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | ATPase domain-containing protein. | 0.433 |
CF8_0176 | CF8_0174 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Ig domain-containing protein. | 0.559 |
CF8_0176 | CF8_0175 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | acyl-CoA dehydrogenase domain-containing. | 0.773 |
CF8_0176 | CF8_0177 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.621 |
CF8_0176 | CF8_3629 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | protein-L-isoaspartate(D-aspartate). | 0.504 |
CF8_0177 | CF8_0174 | Hypothetical protein. | Ig domain-containing protein. | 0.449 |
CF8_0177 | CF8_0175 | Hypothetical protein. | acyl-CoA dehydrogenase domain-containing. | 0.608 |
CF8_0177 | CF8_0176 | Hypothetical protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.621 |
CF8_3629 | CF8_0176 | protein-L-isoaspartate(D-aspartate). | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.504 |