Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0189Biotin/lipoyl attachment domain-containing. (77 aa)    
Predicted Functional Partners:
CF8_0165
Carboxyl transferase.
  
 0.989
CF8_3593
Carboxyl transferase.
  
 0.989
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
 
 0.985
CF8_1140
propionyl-CoA carboxylase.
 
 0.952
CF8_3009
Carboxyl transferase.
 
 0.922
CF8_0071
propionyl-CoA carboxylase.
  
 0.910
CF8_3637
propionyl-CoA carboxylase.
  
 0.910
CF8_2503
Glutamate synthase (NADH) large subunit.
   
 
  0.807
CF8_1141
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.800
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
  
 0.795
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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