Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0195DNA polymerase III, subunits gamma and tau. (308 aa)    
Predicted Functional Partners:
CF8_3797
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.990
CF8_1551
DNA polymerase III, delta subunit.
 
 
 0.989
CF8_2655
DNA polymerase III subunit alpha.
  
 0.953
CF8_0270
DNA polymerase III, delta prime subunit.
 
  
  0.933
CF8_2688
Error-prone DNA polymerase; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
  
 0.914
CF8_2751
Hypothetical protein.
  
 0.877
CF8_1250
UvrD/REP helicase.
 
 
 0.876
CF8_1059
Single-strand binding protein.
    
 0.865
CF8_1760
Single-strand binding protein/primosomal.
    
 0.865
CF8_2090
Single-strand binding protein/primosomal.
    
 0.865
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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