STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0232acetyl-CoA synthetase. (186 aa)    
Predicted Functional Partners:
CF8_2824
propionate--CoA ligase.
 
  
  0.813
CF8_0737
Citrate synthase; Belongs to the citrate synthase family.
  
 0.806
CF8_3649
Short chain enoyl-CoA hydratase.
  
 
 0.793
CF8_3821
Citrate synthase 2; Belongs to the citrate synthase family.
  
 0.782
CF8_1284
Malate synthase A; Belongs to the malate synthase family.
   
 0.773
CF8_3999
Citrate synthase.
  
 0.762
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
  
 
 0.754
CF8_2315
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.752
cobB
Silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
    
 0.743
CF8_3829
Silent information regulator protein Sir2.
    
 0.743
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.