Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0290Binding-protein-dependent transport system. (544 aa)    
Predicted Functional Partners:
CF8_0289
ABC transporter periplasmic-binding protein.
 
 
 0.993
CF8_0291
ABC transporter-like protein.
 
  
 0.968
CF8_3018
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 0.906
CF8_0812
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
  
 0.892
CF8_3016
Extracellular solute-binding protein.
  
 
 0.882
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
  
  0.747
CF8_2959
ABC transporter-like protein.
  
 
  0.727
CF8_1607
ABC-3 protein.
     
 0.705
CF8_1608
ABC transporter-like protein.
     
 0.683
CF8_0470
Sulfate ABC transporter, inner membrane subunit.
   
 
  0.677
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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