STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0301Alkylhydroperoxidase. (191 aa)    
Predicted Functional Partners:
CF8_0302
Sigma-70 region 2 domain-containing protein; Belongs to the sigma-70 factor family.
 
     0.916
CF8_3727
Sigma-70 region 2 domain-containing protein; Belongs to the sigma-70 factor family.
 
     0.622
CF8_0296
acyl-CoA oxidase domain-containing protein.
       0.608
CF8_0297
Short-chain dehydrogenase/reductase SDR.
       0.608
CF8_0298
Hypothetical protein.
       0.608
CF8_0299
Methyltransferase.
       0.608
CF8_2384
Transposase IS116/IS110/IS902 family.
 
     0.479
CF8_4016
4-carboxymuconolactone decarboxylase domain protein.
    
 0.462
CF8_0295
Hypothetical protein.
       0.455
CF8_1471
Hypothetical protein.
  
     0.418
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.