STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0340ABC-type sugar transport system periplasmic. (374 aa)    
Predicted Functional Partners:
CF8_0355
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
CF8_3398
Hypothetical protein.
   
 0.957
CF8_2195
Thioredoxin reductase.
   
 0.951
CF8_1287
ABC transporter-like protein.
 
 0.933
CF8_0354
ABC transporter-like protein.
 
 0.925
CF8_3401
ATPase domain-containing protein.
    
 0.854
CF8_3981
ABC transporter-like protein.
  
 0.818
CF8_1288
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.764
CF8_1693
ATPase domain-containing protein.
    
 0.734
CF8_1155
ATPase domain-containing protein.
    
  0.679
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.