Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0349Nitrilase/cyanide hydratase and apolipoprotein. (277 aa)    
Predicted Functional Partners:
CF8_2503
Glutamate synthase (NADH) large subunit.
    
 0.865
CF8_0346
Molybdopterin dehydrogenase, FAD-binding.
       0.773
CF8_0347
2Fe-2S iron-sulfur cluster binding protein.
       0.773
CF8_0348
Xanthine dehydrogenase, molybdenum binding.
       0.773
CF8_0793
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.716
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
     
 0.680
CF8_4123
Hypothetical protein.
     
  0.661
CF8_1408
Alpha-ketoglutarate decarboxylase.
     
  0.660
CF8_0345
Carbon monoxide dehydrogenase subunit G.
       0.659
CF8_0565
Short-chain dehydrogenase/reductase SDR.
    
 0.551
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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