Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hemLGlutamate-1-semialdehyde 2,1-aminomutase. (420 aa)    
Predicted Functional Partners:
CF8_0425
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.995
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.992
CF8_1923
uroporphyrinogen-III C-methyltransferase.
 
  
 0.973
CF8_0424
uroporphyrinogen-III synthase.
 
 
 0.972
CF8_0429
Redoxin domain-containing protein.
  
  
 0.972
CF8_0428
Phosphoglycerate mutase.
  
    0.970
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.956
CF8_0432
Cytochrome c assembly protein.
 
  
 0.895
CF8_0430
Cytochrome c biogenesis protein, transmembrane.
  
  
 0.876
CF8_0431
ResB family protein.
  
  
 0.867
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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