STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0511DNA-3-methyladenine glycosylase I. (196 aa)    
Predicted Functional Partners:
CF8_0512
Murein hydrolase regulator LrgA.
       0.773
CF8_0513
Antiholin.
       0.773
CF8_0514
Amidase.
       0.705
CF8_2903
DNA-3-methyladenine glycosylase II.
 
   
 0.618
CF8_0509
Hypothetical protein.
 
     0.596
CF8_0510
ArsR family transcriptional regulator.
       0.548
CF8_0508
Hypothetical protein.
       0.545
CF8_0507
Stress protein.
       0.538
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.526
CF8_0390
HhH-GPD family protein.
     
 0.471
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.