STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0566Aromatic-ring-hydroxylating dioxygenase, beta. (174 aa)    
Predicted Functional Partners:
CF8_0567
Rieske (2Fe-2S) domain-containing protein.
 
 0.999
CF8_0565
Short-chain dehydrogenase/reductase SDR.
 
 
 0.998
CF8_2170
Rieske (2Fe-2S) domain-containing protein.
  
 0.980
CF8_0564
Major facilitator transporter.
 
  
 0.933
CF8_0563
Regulatory protein, LuxR.
 
     0.925
CF8_0572
Muconolactone delta-isomerase.
 
  
 0.897
CF8_0571
Catechol 1,2-dioxygenase.
 
  
 0.790
CF8_0552
Catechol 1,2-dioxygenase.
 
  
 0.773
CF8_0570
Mandelate racemase/muconate lactonizing protein.
 
  
 0.743
CF8_0615
Ferredoxin.
  
 
 0.707
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.