Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
CF8_0573Methyltransferase type 12. (201 aa)    
Predicted Functional Partners:
CF8_1565
FAD dependent oxidoreductase.
      0.892
CF8_0344
Hypothetical protein.
   
 0.831
CF8_0571
Catechol 1,2-dioxygenase.
       0.737
CF8_0572
Muconolactone delta-isomerase.
       0.737
CF8_0369
FAD dependent oxidoreductase; Belongs to the GcvT family.
   
 0.705
CF8_1218
Hypothetical protein.
   
   0.627
CF8_0569
LysR, substrate-binding protein.
       0.600
CF8_0570
Mandelate racemase/muconate lactonizing protein.
       0.600
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
  0.588
CF8_3492
Hypothetical protein.
   
 
  0.588
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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