Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0604Glutamate synthase (ferredoxin); Belongs to the glutamate synthase family. (512 aa)    
Predicted Functional Partners:
CF8_2503
Glutamate synthase (NADH) large subunit.
  
 0.987
CF8_2504
Glutamate synthase subunit beta.
 0.984
CF8_0366
4Fe-4S ferredoxin iron-sulfur binding protein.
  
 0.931
CF8_1795
4Fe-4S ferredoxin iron-sulfur binding protein.
  
 0.931
CF8_2102
4Fe-4S ferredoxin iron-sulfur binding protein.
  
 0.931
CF8_0326
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.930
CF8_0333
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.930
CF8_1652
4Fe-4S ferredoxin iron-sulfur binding protein.
  
 0.905
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.897
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.860
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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