Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
CF8_0612Thiamine S protein. (91 aa)    
Predicted Functional Partners:
CF8_1236
UBA/THIF-type NAD/FAD binding protein.
 
 0.987
CF8_0335
Molybdopterin synthase subunit MoaE.
  
 0.955
CF8_1263
Molybdopterin synthase subunit MoaE.
  
 0.955
CF8_0611
Threonine synthase.
 
     0.937
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
  
 
 0.886
CF8_1013
Mov34/MPN/PAD-1 family protein.
 
 
 0.882
CF8_1015
Cysteine synthase.
 
 
 0.846
CF8_1255
Hypothetical protein.
  
 0.813
CF8_1014
Thiamine S protein.
     
  0.806
CF8_3153
Cystathionine beta-synthase.
  
 
 0.794
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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