STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0618GDSL family lipase. (276 aa)    
Predicted Functional Partners:
CF8_0986
Metallophosphoesterase.
   
  0.657
CF8_2753
Hypothetical protein.
   
  0.657
CF8_3695
Hypothetical protein.
   
  0.657
CF8_0619
Lysine exporter protein LysE/YggA.
       0.634
CF8_0616
Fatty acid desaturase; Overlaps another CDS with the same product name.
       0.603
CF8_0617
Fatty acid desaturase; Overlaps another CDS with the same product name.
       0.603
CF8_0620
Hypothetical protein.
       0.580
CF8_0615
Ferredoxin.
       0.516
CF8_3051
Von Willebrand factor, type A.
  
     0.501
CF8_2962
Hypothetical protein.
  
 
  0.470
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.