Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0735acyl-CoA dehydrogenase domain-containing. (383 aa)    
Predicted Functional Partners:
CF8_0734
acyl-CoA dehydrogenase domain-containing; Overlaps another CDS with the same product name.
     0.950
CF8_0733
acyl-CoA dehydrogenase domain-containing; Overlaps another CDS with the same product name.
 
    
0.794
CF8_2315
3-hydroxyacyl-CoA dehydrogenase.
  
 0.748
CF8_3649
Short chain enoyl-CoA hydratase.
  
 0.748
CF8_0736
Peptidase S1 and S6, chymotrypsin/Hap.
   
  0.679
CF8_2314
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.670
CF8_3055
Dehydratase.
  
  0.669
CF8_1498
Electron transfer flavoprotein, alpha subunit.
  
   0.667
CF8_1497
Electron transfer flavoprotein beta-subunit.
  
   0.660
CF8_1438
methylmalonyl-CoA mutase.
    
 0.658
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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