STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0759Glycoside hydrolase family 3 protein. (593 aa)    
Predicted Functional Partners:
CF8_3329
Hypothetical protein.
    
 0.752
CF8_0757
Alcohol dehydrogenase.
       0.704
CF8_0758
Beta-lactamase domain-containing protein.
       0.701
CF8_2534
Glycoside hydrolase family 3 protein.
  
  
 
0.673
CF8_0756
Hypothetical protein.
       0.660
CF8_1739
Peptidase M23B.
 
  
 0.628
CF8_1208
Endonuclease/exonuclease/phosphatase.
    
  0.596
CF8_0755
Hypothetical protein.
       0.579
CF8_3263
PTS system glucose-like transporter subunit IIB.
  
  
 0.579
CF8_1538
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.566
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.