Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0809Alpha/beta hydrolase fold protein. (300 aa)    
Predicted Functional Partners:
CF8_1408
Alpha-ketoglutarate decarboxylase.
    
 0.798
CF8_3663
2,4-dienoyl-CoA reductase.
  
 0.676
CF8_0810
PGAP1 family protein.
 
  
  0.670
CF8_2956
Alpha/beta hydrolase fold protein.
  
  
  0.661
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
  0.595
CF8_2104
FAD dependent oxidoreductase.
 
 
 
 0.590
rpsB
SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
   
  0.590
CF8_3598
Dehydrogenase catalytic domain-containing.
    
  0.590
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.588
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
  0.588
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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