STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0891Glutamate dehydrogenase (NAD). (1632 aa)    
Predicted Functional Partners:
CF8_2034
Forkhead-associated protein.
    
 
 0.999
CF8_2503
Glutamate synthase (NADH) large subunit.
     
 0.967
CF8_2596
L-glutamine synthetase.
     
 0.939
CF8_1637
L-glutamine synthetase.
     
 0.934
CF8_2504
Glutamate synthase subunit beta.
     
 0.894
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.865
CF8_1408
Alpha-ketoglutarate decarboxylase.
   
 
 0.860
CF8_0886
Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
 
  0.852
CF8_0737
Citrate synthase; Belongs to the citrate synthase family.
     
 0.842
CF8_3821
Citrate synthase 2; Belongs to the citrate synthase family.
     
 0.842
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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