Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CF8_0252 | CF8_0898 | Type II secretion system protein E. | Type II secretion system protein E. | 0.769 |
CF8_0252 | CF8_2738 | Type II secretion system protein E. | Flp pilus assembly protein ATPase CpaE-like. | 0.694 |
CF8_0252 | CF8_2740 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.830 |
CF8_0252 | CF8_2741 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.865 |
CF8_0898 | CF8_0252 | Type II secretion system protein E. | Type II secretion system protein E. | 0.769 |
CF8_0898 | CF8_0917 | Type II secretion system protein E. | Type II secretion system protein E. | 0.765 |
CF8_0898 | CF8_0960 | Type II secretion system protein E. | Type II secretion system protein E. | 0.953 |
CF8_0898 | CF8_0961 | Type II secretion system protein E. | Type II secretion system protein. | 0.829 |
CF8_0898 | CF8_1712 | Type II secretion system protein E. | Type II secretion system protein E. | 0.753 |
CF8_0898 | CF8_1844 | Type II secretion system protein E. | Type II secretion system protein E. | 0.976 |
CF8_0898 | CF8_2349 | Type II secretion system protein E. | Type II secretion system protein E. | 0.725 |
CF8_0898 | CF8_2738 | Type II secretion system protein E. | Flp pilus assembly protein ATPase CpaE-like. | 0.695 |
CF8_0898 | CF8_2740 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.828 |
CF8_0898 | CF8_2741 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.865 |
CF8_0917 | CF8_0898 | Type II secretion system protein E. | Type II secretion system protein E. | 0.765 |
CF8_0917 | CF8_2738 | Type II secretion system protein E. | Flp pilus assembly protein ATPase CpaE-like. | 0.640 |
CF8_0917 | CF8_2740 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.825 |
CF8_0917 | CF8_2741 | Type II secretion system protein E. | Type II secretion system protein; Overlaps another CDS with the same product name. | 0.861 |
CF8_0960 | CF8_0898 | Type II secretion system protein E. | Type II secretion system protein E. | 0.953 |
CF8_0960 | CF8_0961 | Type II secretion system protein E. | Type II secretion system protein. | 0.958 |
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