Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_0930Hypothetical protein. (458 aa)    
Predicted Functional Partners:
CF8_0931
Hypothetical protein.
 
     0.947
CF8_0932
Hypothetical protein.
 
     0.914
CF8_1719
Peptidoglycan-binding LysM.
 
 
   0.806
CF8_0924
Peptidoglycan-binding LysM.
 
 
   0.799
CF8_1734
ATP-binding protein.
 
     0.780
CF8_1733
Hypothetical protein.
 
     0.779
CF8_0929
Hypothetical protein.
       0.776
CF8_1741
Type IV secretory pathway VirD4 components-like protein.
 
     0.775
CF8_3951
Type IV secretory pathway VirD4 components-like protein.
 
     0.772
CF8_1749
DNA primase catalytic core.
  
     0.760
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.