Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_0958GntR-family transcriptional regulator. (252 aa)    
Predicted Functional Partners:
CF8_0957
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.844
CF8_0955
Phosphite transport system-binding protein PtxB.
 
  
 0.821
CF8_3263
PTS system glucose-like transporter subunit IIB.
 
 
 0.789
CF8_0956
Phosphonate ABC transporter.
  
  
 0.779
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.667
phnC
ABC transporter-like protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.634
CF8_3985
GntR family transcriptional regulator.
  
    0.606
CF8_4133
Hypothetical protein.
 
  
 0.493
CF8_1538
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.454
CF8_0157
GntR family transcriptional regulator.
  
    0.440
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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