Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CF8_0982Histidine triad (HIT) protein. (119 aa)    
Predicted Functional Partners:
CF8_1872
Histidine triad (HIT) protein.
  
  
  0.825
CF8_3342
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.687
CF8_3341
Sulfate adenylyltransferase subunit 2.
     
  0.686
CF8_0983
Putative Homoserine dehydrogenase.
       0.637
CF8_1637
L-glutamine synthetase.
   
   0.620
CF8_2596
L-glutamine synthetase.
   
   0.620
CF8_0981
Hypothetical protein.
       0.602
CF8_0984
Short-chain dehydrogenase/reductase SDR.
  
    0.539
CF8_0366
4Fe-4S ferredoxin iron-sulfur binding protein.
   
   0.465
CF8_1795
4Fe-4S ferredoxin iron-sulfur binding protein.
   
   0.465
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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