Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1114Glycosyl transferase family 2. (249 aa)    
Predicted Functional Partners:
CF8_1113
Hypothetical protein.
 
     0.958
CF8_1112
Glycosyl transferase family 2.
 
     0.890
CF8_3857
Glycosyl transferase family protein.
   
  0.619
CF8_2867
Glycosyltransferase.
 
  
  0.602
CF8_1115
Hypothetical protein.
       0.554
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.549
CF8_3181
Glycosyl transferase family 2.
 
 
 0.546
CF8_1992
Dolichyl-phosphate beta-D-mannosyltransferase.
  
  
 
0.526
CF8_1116
Hypothetical protein.
       0.510
CF8_4119
Dolichyl-phosphate beta-D-mannosyltransferase.
  
  
 
0.501
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.