Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_1268Cobalamin (vitamin B12) biosynthesis CbiM. (228 aa)    
Predicted Functional Partners:
CF8_1266
Cobalt ABC transporter, inner membrane subunit.
 
 
 0.990
CF8_1265
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.988
CF8_1034
Cobalt ABC transporter, inner membrane subunit.
 
 
 0.961
CF8_1267
Cobalt transport protein CbiM.
 
  
  0.952
CF8_1035
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.950
CF8_2917
ABC transporter-like protein.
 
 
 0.864
CF8_3383
Phosphate binding protein.
     
  0.820
CF8_1033
ABC-type cobalt transport system.
 
  
  0.812
CF8_1607
ABC-3 protein.
     
  0.811
CF8_0323
Substrate-binding region of ABC-type glycine.
     
  0.792
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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