Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_1280Molybdopterin dehydrogenase, FAD-binding. (449 aa)    
Predicted Functional Partners:
CF8_1281
Xanthine oxidase.
 0.999
CF8_1283
Amidohydrolase.
 
  
  0.957
CF8_1282
Molybdenum cofactor sulfurylase.
 
  
 0.952
CF8_1276
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
  0.917
CF8_1279
Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.912
CF8_0353
Xanthine dehydrogenase, molybdenum binding.
  
  0.903
CF8_1277
Putative urate oxidase.
 
     0.885
CF8_0348
Xanthine dehydrogenase, molybdenum binding.
  
  0.767
CF8_0308
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.687
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.687
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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