Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_1303N-acetylmuramoyl-L-alanine amidase. (587 aa)    
Predicted Functional Partners:
CF8_1302
Transcriptional repressor.
       0.442
CF8_0304
D-alanyl-D-alanine.
     
  0.425
CF8_0608
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
     
  0.425
CF8_2452
Glycoside hydrolase 15.
     
  0.425
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
     
  0.423
CF8_3023
SpoIID/LytB domain-containing protein.
     0.413
CF8_0111
Peptidase S8 and S53, subtilisin, kexin.
     
  0.403
CF8_0112
Hypothetical protein.
     
  0.403
CF8_0492
Flagellar hook-length control protein.
     
  0.403
CF8_0590
Hypothetical protein.
     
  0.403
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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