CF8_1322 protein (Nocardioides sp. CF8) - STRING interaction network

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Score

CF8_1322

Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (84 aa)

Predicted Functional Partners:

rpsS

0.997

rplE

0.997

rpmF

0.997

rpmG

0.995

rpmB

0.994

rpmJ-2

0.987

rpsN

0.985

rplS

0.985

rpsR

0.984

rpsP

0.984

Your Current Organism:

Nocardioides sp. CF8

NCBI taxonomy Id: 110319
Other names: N. sp. CF8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CF8_1322	rplE	CF8_1322	CF8_0688	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.997
CF8_1322	rplS	CF8_1322	CF8_2849	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.985
CF8_1322	rpmB	CF8_1322	CF8_1317	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.994
CF8_1322	rpmF	CF8_1322	CF8_1320	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
CF8_1322	rpmG	CF8_1322	CF8_1316	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.995
CF8_1322	rpmJ-2	CF8_1322	CF8_1318	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.987
CF8_1322	rpsN	CF8_1322	CF8_1315	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.985
CF8_1322	rpsP	CF8_1322	CF8_2853	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.984
CF8_1322	rpsR	CF8_1322	CF8_1319	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.984
CF8_1322	rpsS	CF8_1322	CF8_0680	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997
rplE	CF8_1322	CF8_0688	CF8_1322	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	0.997
rplE	rplS	CF8_0688	CF8_2849	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rplE	rpmB	CF8_0688	CF8_1317	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.987
rplE	rpmF	CF8_0688	CF8_1320	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplE	rpmG	CF8_0688	CF8_1316	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplE	rpmJ-2	CF8_0688	CF8_1318	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.984
rplE	rpsN	CF8_0688	CF8_1315	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.984
rplE	rpsP	CF8_0688	CF8_2853	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplE	rpsR	CF8_0688	CF8_1319	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplE	rpsS	CF8_0688	CF8_0680	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999