STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1438methylmalonyl-CoA mutase. (681 aa)    
Predicted Functional Partners:
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
0.999
CF8_3066
methylmalonyl-CoA mutase.
 
0.996
CF8_1459
methylmalonyl-CoA epimerase.
  
 0.976
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
    
 0.970
CF8_1461
LAO/AO transport system ATPase.
  
 0.929
CF8_0951
LAO/AO transport system ATPase.
 
  
 0.927
CF8_3065
LAO/AO transport system ATPase.
 
  
 0.926
CF8_3067
methylmalonyl-CoA mutase.
  0.924
CF8_0999
4-hydroxyphenylpyruvate dioxygenase.
    
 0.876
CF8_3640
Hypothetical protein.
    
 0.823
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (26%) [HD]