Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF8_0467 | CF8_0999 | CF8_0467 | CF8_0999 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.659 |
CF8_0467 | CF8_1438 | CF8_0467 | CF8_1438 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.970 |
CF8_0467 | CF8_1459 | CF8_0467 | CF8_1459 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | methylmalonyl-CoA epimerase. | 0.659 |
CF8_0467 | CF8_3066 | CF8_0467 | CF8_3066 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.960 |
CF8_0467 | CF8_3067 | CF8_0467 | CF8_3067 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | methylmalonyl-CoA mutase. | 0.830 |
CF8_0467 | CF8_3640 | CF8_0467 | CF8_3640 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Hypothetical protein. | 0.636 |
CF8_0467 | icmF | CF8_0467 | CF8_2551 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.979 |
CF8_0951 | CF8_1438 | CF8_0951 | CF8_1438 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase. | 0.927 |
CF8_0951 | CF8_1459 | CF8_0951 | CF8_1459 | LAO/AO transport system ATPase. | methylmalonyl-CoA epimerase. | 0.794 |
CF8_0951 | CF8_3066 | CF8_0951 | CF8_3066 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase. | 0.908 |
CF8_0951 | CF8_3067 | CF8_0951 | CF8_3067 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase. | 0.739 |
CF8_0951 | icmF | CF8_0951 | CF8_2551 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.697 |
CF8_0999 | CF8_0467 | CF8_0999 | CF8_0467 | 4-hydroxyphenylpyruvate dioxygenase. | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.659 |
CF8_0999 | CF8_1438 | CF8_0999 | CF8_1438 | 4-hydroxyphenylpyruvate dioxygenase. | methylmalonyl-CoA mutase. | 0.876 |
CF8_0999 | CF8_3066 | CF8_0999 | CF8_3066 | 4-hydroxyphenylpyruvate dioxygenase. | methylmalonyl-CoA mutase. | 0.715 |
CF8_0999 | icmF | CF8_0999 | CF8_2551 | 4-hydroxyphenylpyruvate dioxygenase. | methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.796 |
CF8_1438 | CF8_0467 | CF8_1438 | CF8_0467 | methylmalonyl-CoA mutase. | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.970 |
CF8_1438 | CF8_0951 | CF8_1438 | CF8_0951 | methylmalonyl-CoA mutase. | LAO/AO transport system ATPase. | 0.927 |
CF8_1438 | CF8_0999 | CF8_1438 | CF8_0999 | methylmalonyl-CoA mutase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.876 |
CF8_1438 | CF8_1459 | CF8_1438 | CF8_1459 | methylmalonyl-CoA mutase. | methylmalonyl-CoA epimerase. | 0.976 |
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