Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1610Hypothetical protein. (106 aa)    
Predicted Functional Partners:
CF8_1614
Hypothetical protein.
 
     0.718
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.636
CF8_2537
Hypothetical protein.
  
     0.594
CF8_1608
ABC transporter-like protein.
       0.576
CF8_1609
Periplasmic solute binding protein.
       0.568
CF8_1607
ABC-3 protein.
       0.563
CF8_1612
Hypothetical protein.
       0.552
CF8_1606
Zinc uptake regulator; Belongs to the Fur family.
       0.551
CF8_0254
Type II secretion system protein; Overlaps another CDS with the same product name.
  
     0.543
CF8_3117
Hypothetical protein.
  
     0.531
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.