STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1771Thioesterase superfamily protein. (162 aa)    
Predicted Functional Partners:
CF8_1770
Regulatory protein, TetR.
       0.773
CF8_3390
Thioesterase superfamily protein.
  
     0.582
CF8_1769
MMPL domain-containing protein.
   
   0.513
def-3
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
     0.470
CF8_1768
Cytochrome P450.
       0.466
CF8_3201
phenylacetate-CoA oxygenase/reductase, PaaK.
  
 
  0.437
CF8_0615
Ferredoxin.
  
 
  0.418
CF8_1356
phenylacetate-CoA oxygenase/reductase, PaaK.
  
 
  0.418
CF8_1404
Ferredoxin.
  
 
  0.418
CF8_2168
Ferredoxin.
  
 
  0.418
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.