Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CF8_0534 | CF8_0535 | ABC transporter-like protein. | Hypothetical protein. | 0.997 |
CF8_0534 | CF8_0536 | ABC transporter-like protein. | Hypothetical protein. | 0.998 |
CF8_0534 | CF8_1798 | ABC transporter-like protein. | Hypothetical protein. | 0.987 |
CF8_0534 | CF8_1800 | ABC transporter-like protein. | Virulence factor Mce family protein. | 0.959 |
CF8_0534 | CF8_1801 | ABC transporter-like protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.954 |
CF8_0534 | CF8_1802 | ABC transporter-like protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.954 |
CF8_0534 | CF8_1803 | ABC transporter-like protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.954 |
CF8_0534 | CF8_1804 | ABC transporter-like protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.970 |
CF8_0534 | CF8_2257 | ABC transporter-like protein. | Hypothetical protein. | 0.991 |
CF8_0534 | CF8_2258 | ABC transporter-like protein. | Hypothetical protein. | 0.989 |
CF8_0535 | CF8_0534 | Hypothetical protein. | ABC transporter-like protein. | 0.997 |
CF8_0535 | CF8_0536 | Hypothetical protein. | Hypothetical protein. | 0.949 |
CF8_0535 | CF8_1800 | Hypothetical protein. | Virulence factor Mce family protein. | 0.947 |
CF8_0535 | CF8_1801 | Hypothetical protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.940 |
CF8_0535 | CF8_1802 | Hypothetical protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.941 |
CF8_0535 | CF8_1803 | Hypothetical protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.940 |
CF8_0535 | CF8_1804 | Hypothetical protein. | Virulence factor Mce family protein; Overlaps another CDS with the same product name. | 0.951 |
CF8_0535 | CF8_2257 | Hypothetical protein. | Hypothetical protein. | 0.782 |
CF8_0536 | CF8_0534 | Hypothetical protein. | ABC transporter-like protein. | 0.998 |
CF8_0536 | CF8_0535 | Hypothetical protein. | Hypothetical protein. | 0.949 |
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