STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1815Hypothetical protein; Overlaps another CDS with the same product name. (299 aa)    
Predicted Functional Partners:
CF8_1816
Hypothetical protein; Overlaps another CDS with the same product name.
 
     0.947
CF8_1817
Cytochrome P450.
       0.773
CF8_1818
Thioesterase superfamily protein.
       0.773
CF8_3476
Hypothetical protein.
 
     0.773
CF8_1598
Hypothetical protein.
  
     0.739
CF8_3288
Hypothetical protein.
  
     0.729
CF8_3271
Metallophosphoesterase.
  
     0.712
CF8_1211
Methyltransferase type 11.
  
     0.705
CF8_3095
Hypothetical protein.
  
     0.686
CF8_0136
LuxR family transcriptional regulator.
  
     0.667
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.