Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF8_1948 | CF8_1949 | CF8_1948 | CF8_1949 | Major facilitator transporter. | Magnesium and cobalt transport protein CorA. | 0.773 |
CF8_1948 | CF8_1950 | CF8_1948 | CF8_1950 | Major facilitator transporter. | Magnesium and cobalt transport protein CorA. | 0.588 |
CF8_1948 | CF8_1951 | CF8_1948 | CF8_1951 | Major facilitator transporter. | Phosphoglycerate mutase. | 0.417 |
CF8_1949 | CF8_1948 | CF8_1949 | CF8_1948 | Magnesium and cobalt transport protein CorA. | Major facilitator transporter. | 0.773 |
CF8_1949 | CF8_1950 | CF8_1949 | CF8_1950 | Magnesium and cobalt transport protein CorA. | Magnesium and cobalt transport protein CorA. | 0.960 |
CF8_1949 | CF8_1951 | CF8_1949 | CF8_1951 | Magnesium and cobalt transport protein CorA. | Phosphoglycerate mutase. | 0.478 |
CF8_1949 | CF8_1952 | CF8_1949 | CF8_1952 | Magnesium and cobalt transport protein CorA. | Hypothetical protein. | 0.462 |
CF8_1949 | CF8_1953 | CF8_1949 | CF8_1953 | Magnesium and cobalt transport protein CorA. | Hypothetical protein. | 0.462 |
CF8_1949 | mshC | CF8_1949 | CF8_1954 | Magnesium and cobalt transport protein CorA. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.440 |
CF8_1950 | CF8_1948 | CF8_1950 | CF8_1948 | Magnesium and cobalt transport protein CorA. | Major facilitator transporter. | 0.588 |
CF8_1950 | CF8_1949 | CF8_1950 | CF8_1949 | Magnesium and cobalt transport protein CorA. | Magnesium and cobalt transport protein CorA. | 0.960 |
CF8_1950 | CF8_1951 | CF8_1950 | CF8_1951 | Magnesium and cobalt transport protein CorA. | Phosphoglycerate mutase. | 0.582 |
CF8_1950 | CF8_1952 | CF8_1950 | CF8_1952 | Magnesium and cobalt transport protein CorA. | Hypothetical protein. | 0.559 |
CF8_1950 | CF8_1953 | CF8_1950 | CF8_1953 | Magnesium and cobalt transport protein CorA. | Hypothetical protein. | 0.559 |
CF8_1950 | mshC | CF8_1950 | CF8_1954 | Magnesium and cobalt transport protein CorA. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.585 |
CF8_1951 | CF8_1948 | CF8_1951 | CF8_1948 | Phosphoglycerate mutase. | Major facilitator transporter. | 0.417 |
CF8_1951 | CF8_1949 | CF8_1951 | CF8_1949 | Phosphoglycerate mutase. | Magnesium and cobalt transport protein CorA. | 0.478 |
CF8_1951 | CF8_1950 | CF8_1951 | CF8_1950 | Phosphoglycerate mutase. | Magnesium and cobalt transport protein CorA. | 0.582 |
CF8_1951 | CF8_1952 | CF8_1951 | CF8_1952 | Phosphoglycerate mutase. | Hypothetical protein. | 0.950 |
CF8_1951 | CF8_1953 | CF8_1951 | CF8_1953 | Phosphoglycerate mutase. | Hypothetical protein. | 0.954 |
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