Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CF8_1962 | CF8_1963 | CF8_1962 | CF8_1963 | Hypothetical protein. | Peptidase M50; Belongs to the peptidase M50B family. | 0.695 |
| CF8_1962 | CF8_1964 | CF8_1962 | CF8_1964 | Hypothetical protein. | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | 0.568 |
| CF8_1962 | CF8_1965 | CF8_1962 | CF8_1965 | Hypothetical protein. | Hypothetical protein. | 0.491 |
| CF8_1962 | arc | CF8_1962 | CF8_1967 | Hypothetical protein. | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.598 |
| CF8_1963 | CF8_1962 | CF8_1963 | CF8_1962 | Peptidase M50; Belongs to the peptidase M50B family. | Hypothetical protein. | 0.695 |
| CF8_1963 | CF8_1964 | CF8_1963 | CF8_1964 | Peptidase M50; Belongs to the peptidase M50B family. | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | 0.695 |
| CF8_1963 | CF8_1965 | CF8_1963 | CF8_1965 | Peptidase M50; Belongs to the peptidase M50B family. | Hypothetical protein. | 0.642 |
| CF8_1963 | arc | CF8_1963 | CF8_1967 | Peptidase M50; Belongs to the peptidase M50B family. | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.614 |
| CF8_1964 | CF8_1962 | CF8_1964 | CF8_1962 | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | Hypothetical protein. | 0.568 |
| CF8_1964 | CF8_1963 | CF8_1964 | CF8_1963 | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | Peptidase M50; Belongs to the peptidase M50B family. | 0.695 |
| CF8_1964 | CF8_1965 | CF8_1964 | CF8_1965 | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | Hypothetical protein. | 0.773 |
| CF8_1964 | arc | CF8_1964 | CF8_1967 | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.778 |
| CF8_1965 | CF8_1962 | CF8_1965 | CF8_1962 | Hypothetical protein. | Hypothetical protein. | 0.491 |
| CF8_1965 | CF8_1963 | CF8_1965 | CF8_1963 | Hypothetical protein. | Peptidase M50; Belongs to the peptidase M50B family. | 0.642 |
| CF8_1965 | CF8_1964 | CF8_1965 | CF8_1964 | Hypothetical protein. | tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. | 0.773 |
| CF8_1965 | arc | CF8_1965 | CF8_1967 | Hypothetical protein. | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.513 |
| CF8_1965 | coaD | CF8_1965 | CF8_2881 | Hypothetical protein. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.442 |
| CF8_1965 | rnhB | CF8_1965 | CF8_2847 | Hypothetical protein. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.433 |
| arc | CF8_1962 | CF8_1967 | CF8_1962 | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Hypothetical protein. | 0.598 |
| arc | CF8_1963 | CF8_1967 | CF8_1963 | Vesicle-fusing ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | Peptidase M50; Belongs to the peptidase M50B family. | 0.614 |
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