STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_1993FxsA cytoplasmic membrane protein. (165 aa)    
Predicted Functional Partners:
CF8_3580
Amidohydrolase 3.
  
    0.829
CF8_0165
Carboxyl transferase.
    
  0.813
CF8_3593
Carboxyl transferase.
    
  0.813
CF8_1992
Dolichyl-phosphate beta-D-mannosyltransferase.
  
    0.806
lnt-2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.804
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
  
  0.507
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
    
  0.492
CF8_2505
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.486
CF8_2493
Aminotransferase, class IV.
  
  
  0.478
CF8_2646
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
   
    0.478
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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