Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_1996Glycerophosphoryl diester phosphodiesterase. (260 aa)    
Predicted Functional Partners:
CF8_0281
Glycerophosphodiester phosphodiesterase.
  
  
  0.910
CF8_0084
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.857
CF8_1995
Major facilitator transporter.
 
     0.823
CF8_0523
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.734
CF8_1997
Hypothetical protein.
       0.723
CF8_3111
Glycerophosphoryl diester phosphodiesterase.
     
  0.630
CF8_3128
Glycerophosphoryl diester phosphodiesterase.
  
  
 
0.595
CF8_1998
UDP-N-acetylglucosamine.
     
 0.553
CF8_2715
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.521
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
       0.487
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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