Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2001Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (221 aa)    
Predicted Functional Partners:
CF8_2000
Low molecular weight phosphotyrosine protein.
     0.942
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 0.872
CF8_3026
Protein phosphatase 2C domain-containing.
    
 0.846
CF8_0648
Protein phosphatase 2C domain-containing.
    
  0.845
CF8_2715
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
 
 0.839
CF8_0394
Ankyrin repeat protein.
    
  0.791
CF8_0543
Hypothetical protein.
    
  0.791
CF8_1806
Hypothetical protein.
    
  0.791
CF8_1807
Heat shock protein DnaJ domain-containing.
    
  0.791
CF8_2093
Ankyrin.
    
  0.791
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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