Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2017Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (297 aa)    
Predicted Functional Partners:
CF8_2018
OsmC family protein.
       0.773
CF8_2503
Glutamate synthase (NADH) large subunit.
     
 0.772
CF8_0565
Short-chain dehydrogenase/reductase SDR.
  
 0.751
CF8_3263
PTS system glucose-like transporter subunit IIB.
     
 0.751
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
  
 0.713
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.682
CF8_3492
Hypothetical protein.
   
  0.682
CF8_3201
phenylacetate-CoA oxygenase/reductase, PaaK.
   
 0.669
CF8_4192
Hypothetical protein.
    
  0.647
CF8_0410
Histone deacetylase superfamily protein.
    
  0.644
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.